| ID | hsa_circ_0000044 | |||||
| Alias | hsa_circ_000829 | |||||
| Position | chr1:31465236-31479949 | |||||
| Strand | - | |||||
| Genomic length | 14713 | |||||
| Spliced sequence length | 726 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_014676 | |||||
| Gene symbol | PUM1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | WAS2 | 2 | 2 | 11 | 3 | |
| Jeck2013 | Hs68_RNase | 80 | 49 | 9 | 14 | Hs68_control | 5 | 5 | 16 | 15 |
| Memczak2013 | cd_19 | 3 | 3 | 2 | 4 | |
| Rybak2015 | cerebellum | 17 | 12 | 83 | 145 | frontal_cortex | 28 | 20 | 74 | 111 | parietal_lobe | 8 | 6 | 77 | 131 | Sy5y_exp1_D2 | 2 | 2 | 22 | 20 | temporal_lobe | 9 | 7 | 41 | 79 | occipital_lobe | 75 | 37 | 67 | 125 | Sy5y_exp1_D4 | 3 | 3 | 21 | 24 | diencephalon | 23 | 14 | 88 | 137 |
| Salzman2013 | K562 | 12 | 11 | 187 | 161 | Gm12878 | 10 | 6 | 36 | 122 | Sknshra | H1hesc | 14 | 9 | 52 | 264 | Bj | 4 | 3 | 9 | 117 | Nhek | 1 | 1 | 30 | 220 | Helas3 | 7 | 6 | 19 | 258 | Hepg2 | 6 | 5 | 14 | 258 | A549 | 6 | 5 | 20 | 110 | Ag04450 | 5 | 4 | 39 | 116 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||